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@gaurav gaurav commented Sep 5, 2023

This PR generates a conflated GeneProtein synonym file based on the GeneProtein conflation.

WIP Currently being tested on Sterling.

@gaurav gaurav force-pushed the conflate-gene-protein-synonyms branch from 7ec9cdb to 1403e8b Compare December 3, 2023 04:05
@gaurav gaurav force-pushed the conflate-gene-protein-synonyms branch from 1403e8b to 2eb9ac7 Compare December 3, 2023 04:39
@gaurav gaurav changed the base branch from master to babel-1.3 December 3, 2023 04:47
Base automatically changed from babel-1.3 to master January 24, 2024 19:17
gaurav added a commit that referenced this pull request Sep 15, 2025
…synonyms

This PR adds a new output: `synonyms/GeneProteinConflated.txt`, based on the GeneProtein conflation and the Gene and Protein outputs. It should be pretty similar to the first attempt (PR #185). Also fixes a bug in synonym conflating with taxa that we'd never run into because we'd only conflated DrugChemicals before.

Closes NCATSTranslator/NameResolution#191.
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2 participants